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Pull requests: galaxyproject/tools-iuc

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343 Open 5,828 Closed
343 Open 5,828 Closed
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Pull requests list

DIAMOND: support BLAST DBs and bump to latest version
#7519 opened Dec 8, 2025 by bernt-matthias Loading…
3 of 5 tasks
updated chopper!
#7518 opened Dec 8, 2025 by Smkingsize Loading…
2 of 3 tasks
6
Add Montreal Forced Aligner (MFA) Tool Suite
#7517 opened Dec 8, 2025 by dadrasarmin Loading…
3 of 5 tasks
11
dada2 DM: add unite 10.0
#7513 opened Dec 7, 2025 by bernt-matthias • Draft
3 of 5 tasks
1
Add Qualifilter Galaxy wrapper
#7507 opened Dec 3, 2025 by buhlentozini Loading…
13
Add ImageDimPlot, ImageFeaturePlot to Seurat Visualize
#7501 opened Dec 2, 2025 by khaled196 Loading…
3 of 5 tasks
20
Add support for DESeq2 sample sheet files
#7500 opened Dec 2, 2025 by mvdbeek • Draft
5 tasks
BiaPy 3.6.7
#7499 opened Dec 1, 2025 by danifranco Loading…
2
New tool addition: KneadData
#7498 opened Dec 1, 2025 by xens25 • Draft
5 tasks
41
[WIP] New tool addition: Sourmash tool suite
#7491 opened Nov 27, 2025 by Smkingsize • Draft
3 of 5 tasks
@Smkingsize
15
Replace master in links
#7489 opened Nov 26, 2025 by nsoranzo Loading…
1 of 5 tasks
2
New Tool addition: Haltools
#7488 opened Nov 25, 2025 by Maed0x • Draft
3 of 5 tasks
@Maed0x
62
Updating tools/spapros from version 0.1.5 to 0.1.6
#7486 opened Nov 24, 2025 by gxydevbot Loading…
1
Add deacon and deacon DM
#7473 opened Nov 17, 2025 by SantaMcCloud Loading…
3 of 5 tasks
104
add Spatialdata tool
#7455 opened Nov 13, 2025 by nilchia • Draft
3 of 5 tasks
@nilchia
4
Add kMetaShot and DM for kMetaShot
#7421 opened Oct 30, 2025 by SantaMcCloud Loading…
3 of 5 tasks
32
Update ampvis2
#7418 opened Oct 30, 2025 by bernt-matthias • Draft
3 of 5 tasks
1
Add CellTypist tool for automated celltype annotation
#7415 opened Oct 30, 2025 by pavanvidem • Draft
3 of 5 tasks
6
minimap2 update to 2.30
#7388 opened Oct 25, 2025 by bgruening Loading…
3 of 5 tasks
3
New tool addition: Beast2 wrappers
#7387 opened Oct 24, 2025 by SaimMomin12 • Draft
3 of 5 tasks
@SaimMomin12
2
[WIP] add alpha version of pangenie
#7380 opened Oct 23, 2025 by bgruening • Draft
Updating tools/bigscape from version 1.1.9 to 2.0.0
#7372 opened Oct 20, 2025 by gxydevbot Loading…
1
[WIP] odgi update + new tools
#7371 opened Oct 19, 2025 by bgruening • Draft
@RZ9082
added oatk tool
#7367 opened Oct 18, 2025 by Deeptivarshney Loading…
2 of 4 tasks
8
Add memory flag to metaSPAdes for better RAM handeling
#7363 opened Oct 15, 2025 by SantaMcCloud Loading…
3 of 5 tasks
17
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