1.0.4 🌈

Changes

🚀 Features

• Speedup For EDistance-like distances (#880) @selmanozleyen
• add milo-edger extra (#874) @mschilli87
• ci: fix isort formatting (#878) @flying-sheep
• Add permutation test (#726) @maltekuehl

🐛 Bug Fixes

• Remove cmap default in GuideAssignment.heatmap (#887) @Zethson
• fix: adapt fixture usage to newer pytest versions (#879) @flying-sheep
• remove decoupler mention (#869) @Zethson
• unpin R version in CI (#863) @Zethson
• Fix harded control key in plot_heatmap (#862) @Zethson

🧰 Maintenance

• switch to template (#866) @Zethson
• Add dataset cache back (#885) @Zethson
• metadata to scverse AWS (#860) @Zethson

1.0.3 🌈

🚀 Features

• Support layers for Augur load (#852) @Zethson
• Improve mixscape parameter names (#848) @Zethson
• Replace figshare & zenodo URLs with scverse URLs (#849) @Zethson
• Remove scvi-tools dependency (#844) @Zethson

1.0.2 🌈

Changes

🐛 Bug Fixes

• Fixed GDSC and PRISM annotation warnings (#835) @Lilly-May
• Fix: Validate 'type' parameter in Tasccoda.load (#839) @JuanTejedor
• Partial fixes for make_arviz (#834) @jpintar
• Fix setting of rng_key in make_arviz (#831) @jpintar

1.0.1 🌈

🚀 Features

• Add support for gamma parameter in MMD distance (#825) @Zethson
• Run notebooks in CI (#815) @Zethson

🐛 Bug Fixes

• Fix milo output writing (#821) @Zethson

1.0.0 🌈

Changes

🚀 Features

• Simplify guide assignment tutorial (#796) @Zethson
• Add pydeseq2 solver to milo (#795) @Zethson

0.11.5 🌈

🚀 Features

• Move to trusted publishing (#790) @Zethson
• Add conda-forge to installation instructions (#789) @Zethson
• fix seaborn 0.14 compat & testing dependencies & speed up tests (#787) @Zethson
• Support > 2 colors in pt.tl.Sccoda.plot_boxplots (#784) @mschilli87

🐛 Bug Fixes

• Fix LIL support for AnnData 0.12 (#792) @Zethson
• Fix compatibility with rpy 3.6.0 in milo (#791) @seohyonkim

0.11.4 🌈

Changes

🧰 Maintenance

• Remove decoupler (#783) @Zethson

0.11.3 🌈

Changes

🚀 Features

• add about page (#770) @Zethson
• Simplify Metadata errors (#765) @Zethson
• Standardize scCODA plot palette interface (#773) @mschilli87

🐛 Bug Fixes

• Add statmod installation instructions (#776) @Zethson

0.11.2 🌈

Changes

🚀 Features

• Simplify Metadata errors (#765) @Zethson

0.11.1 🌈

Changes

• fix scCODA not requiring tcoda extra (#762) @Zethson

🧰 Maintenance

• Restructure documentation (#762) @Zethson