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1. phylotoast phylotoast Public

   Tools for phylogenetic data analysis including visualization and cluster-computing support.

   Python 14 3

2. kraken-biom kraken-biom Public

   Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

   Python 57 17

3. PyMGRAST PyMGRAST Public

   A python interface to the MG-RAST API including executable scripts providing higher level functionality. Designed to utilize the resources of the Ohio Supercomputer Center (www.osc.edu), but can be…

   Python 3 1

4. find find Public

   Flow Investigation using N-Dimensions (FIND) is a program designed for analysis and visualization of Flow Cytometry data. FIND focuses specifically on automated population discovery (clustering) me…

   Python 2

5. ProkaryMetrics ProkaryMetrics Public

   Visualize and analyze 3D biofilm data from fluorescent micrographs

   Python 1

6. kraken kraken Public

   Forked from DerrickWood/kraken

   Kraken taxonomic sequence classification system

   C++